Coastal Rewilding &
Experimental Ecology Research Group

Coastal Rewilding & Experimental Ecology Research Group

Research

Publications

Our Work

What can we learn from coastal ecosystems to work with nature—and help them cope with climate change and human pressures? We study how coastal ecosystems function and change, from seagrass meadows and shellfish reefs to salt marshes, mangrove forests, artificial reefs, and plankton communities. Our research explores how these systems respond to management actions—such as protecting large animals, improving water quality, and restoring habitats—under different future climate scenarios, and what these changes mean for the ecosystem services they provide to nature and society. By developing new indicators and practical tools, we aim to deliver robust scientific knowledge that supports effective and responsible coastal management.

Building on this, our work focuses on how rewilding can help coastal ecosystems recover and remain resilient. We pay special attention to how connections between ecosystems—across the seascape, the land–sea interface, and food webs—shape ecosystem responses to change. To address these questions, we combine hands-on field experiments with ecological and biogeochemical analyses, tracking technologies, remote sensing, and behavioral studies. Increasingly, we use drones and machine learning to identify rewilding opportunities and to develop innovative tools for ecosystem restoration and management.

Explore our projects here:

Current Research Projects

WildMarsh - Enhancing Coastal Resilience through Trophic Rewilding

This project explores whether trophic rewilding (like reintroducing buffalo) can improve the resilience of salt marshes to climate change, enhance biodiversity, and strengthen ecosystem functioning. We assess how rewilding influences resilience to sea-level rise, storms, and heatwaves, and develop rapid-assessment tools to measure its impacts at larger scales.

Institutes: Wageningen University, Netherlands Institute of Sea Resarch

Period: 2025-2030

Funding Source: NWO ENW-M2

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Megaherbivores and Carbon Dynamics in Seagrass Ecosystems

In Indonesia’s biodiverse seagrass ecosystems, we investigate how green turtles affect carbon storage and greenhouse gas emissions. This work aims to provide accurate data for climate change mitigation strategies and supports Indonesia’s Nationally Determined Contributions.

Institutes: Wageningen University

Period: 2024-2028

Funding Source: LPDP

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Green turtle and Shark behavior as an indicator for seagrass condition?

In the Bahamas we started a collaboration to investigate the change in behavior of green turtles in response to changes in seagrass habitat condition and shark presence

Funding Source: acquisition in progress

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Functional Consequences of Sea Turtle Hybridization

This study investigates how hybridization may affect the ecological roles of sea turtles in their ecosystems and its implications for conservation.

Team Member(s):

Institutes: Wageningen University

Period: 2024 – 2028

Funding Source: NWO ENW M1

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Artificial Structures and the Functioning of the North Sea Ecosystem (ASSESS)

We examine how artificial hard structures, like offshore wind farms, affect nutrient cycling, carbon storage, and ecosystem functioning in the North Sea.

Team Member(s):

Institutes: Wageningen University and Wageningen Marine Research

Period: Nov 2022 – Feb 2027

Funding Source: TKI Deltatechnologie, INSITE North Sea

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NoRegrets – North Sea Renewable Energy Transition

We study benthic communities and the bentho-pelagic food web in and around offshore wind farms, using both traditional and innovative methods to understand the ecological impacts of renewable energy infrastructure.

Institutes: Wageningen Marine Research, Wageningen University

Period: 2025 – 2029

Funding Source: NWO-NWA-ORC

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Sparkling Seas; Understanding Bioluminescent Plankton Dynamics

In “Sparkling Seas” we investigate how bioluminescent plankton are distributed in space and time and how environmental stressors shape their bioluminescence, population dynamics, interactions and toxin production, to better understand their roles in coastal ecosystem functioning under global change.

Institutes: Wageningen University

Period: Aug. 2025 – Aug. 2029

Funding Source: Sectorplan

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SeaSnap

Welcome to SeaSnap – with this tool you can help monitor the condition of seagrass as a citizen scientist. Seagrass are marine plants that are incredibly threatened and are still under-appreciated globally. Your photo will help contribute to marine conservation with just a few taps of your phone. Photos may be used to confirm the current status of seagrass to help train automatic detection of seagrass from the air.

Institutes: Wageningen University, Universitas Gadjah Mada, RISTEK

Period: 2022 – 2030

Funding Source: acquisition in progress

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Marine research at the Aquatic Ecology and Water Quality Management Group - Wageningen University -

Completed Projects

ReViFES - Revitalising North Sea Reef Ecosystem Services

In this project, PhD Caterina Coral (NIOZ, 2020 – 2025) studied the ecological functions of biogenic reefs that form rich habitats and complex food ecosystems in the North Sea, focusing on species such as flat oysters, mussels, and tube-building worms, as well as the intricacies of food web structure and function. Caterina’s PhD was part of the larger ReVIFES project; a collaboration between NIOZ (lead), TU Delft, and Wageningen University. Partners in the project were NWO-TTW, Waardenburg Ecology ARK Rewilding, CIV, Ministerie van LVVN, Natuur & Milieu, Roem van Yerseke, Sas Consultancy, Stichting de Noordzee, Van Oord, Waardenburg Ecology, WWF. A comprehensive reference guide is available for North Sea professionals interested in starting their own reef restoration projects: Download the North Sea ReVIFES booklet here.

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Temperate subtidal reefs were found to enrich ecosystems and stabilise food webs

Global Defaunation and Plant Invasion in Seagrass Ecosystems

In this NWO-VENI project, the Phd project of Alumni Fee Smulders, we studied how changes in large herbivore populations and invasive seagrass species impact seagrass ecosystem services in the Caribbean. Our findings highlight the role of green turtles in influencing invasive species dynamics and seagrass recovery. As we know from our previous research, sea turtles can facilitate the expansion of invasive seagrass H. stipulacea by preferring native T. testudinum seagrass. Diverse and abundant herbivore communities can therefore play an important role in limiting the success of invasions. The conservation of these species may serve as a tool to slow down seagrass invasion and mitigate the potential negative effects of invasive plants on the ecosystem community. In addition, we found that large herbivores, such as green turtles, can shape seagrass meadows through top-down effects from humans (tourist feeding) or predators (shark presence). Sea turtle grazing may limit the recovery rates of seagrass, while moderate fish grazing can improve seagrass resilience. For both above- and belowground seagrass recovery rates, gradual warming may increase seagrass resilience to the positive effects of temperature in subtropical parts of its range.

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We found that megaherbivores, green turtles, may impact expansion of invasive seagrass in the Caribbean, Christianen et al. 2018

Mangroves in a transforming world: Mapping Biogeochemical Connectivity

This project by Sara Pino Cobacho, (part of of NESSC) investigated the links between mangroves, seagrass, and coral ecosystems, focusing on biogeochemical processes and especially mangroves. Sara found that mangroves are significantly impacted by global change drivers such as sargassum brown tides, rising temperatures, and local eutrophication. These impacts not only affect their functionality but also create a feedback loop of mangrove degradation. Additionally, mangroves help lower local water pH and exhibit diverse reproductive strategies as adaptive responses to their environment. The mesocosm experiments employed throughout this thesis have played a vital role in addressing key questions regarding mangrove functionality and underlying biogeochemical processes. The knowledge generated in this thesis fills critical gaps in understanding mangrove ecology and can inform management practices to more efficiently restore and conserve mangroves within connected tropical ecosystems. 

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Conceptual model showing the potential contribution of tropical coastal habitats to water pH regulation. TA: total alkalinity. DIC: dissolved inorganic carbon. OA: ocean acidification. Cobacho et al. 2023

Impact of Sargassum Brown Tides on Seagrass and Mangrove Ecosystems

Since 2011, thick mats of sargassum have been washing ashore along Caribbean coasts. These beaching events, known as ‘brown tides,’ are causing serious ecological and economic problems. We assessed the biogeochemical pathways of how sargassum brown tides affect mangroves and seagrasses using field observations experiments, lab experiments, and combined it with remote sensing. PhD project Luuk Leemans, Radboud University Nijmegen, with NIOZ and WU, 2019-2024

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Population Connectivity and Habitat Use of Sea Turtles

This project mapped sea turtle foraging and nesting habitats in 6 Caribbean Islands of the Dutch Kingdom of the Netherlands. We studied nesting females and foraging subadults, using satellite tracking on nesting females and foraging subadults, isotope analysis and molecular tools – tracks and summary of the research via this storymap. Project funded by NWO-Caribbean, PhD: Jurjan van der Zee 2014-2019, Postdoc Marjolijn.

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Equipped with a satellite transmitter, an adult female green turtle is crawling back to sea in St. Eustatius.

BESE - Biodegradable Ecosystem Engineering Elements

We tested and co-developed biodegradable structures to support seagrass restoration, simulating natural feedback mechanisms that enhance establishment and growth. Our experiments in the Wadden Sea and Bonaire led to further refinement of these 3D restoration structures, which are now being used to upscale restoration across multiple ecosystems worldwide by BESE-products and NIOZ.

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Waddensleutels - Food Web Structure and Restoration of Foundation Species in the Wadden Sea

In this Wadden Sea-wide food web study, we collected stable isotope data from over 10,000 samples to create the first extensive food web of the (Dutch) Wadden Sea, covering 173 species larger than 1 mm from Texel to Eemsdollard. We found that benthic diatoms were the main primary producers, contributing to approximately 70% of the productivity. By examining food web dynamics of foundational species like mussels, we also developed new food web metrics to monitor success in nature conservation.

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Wadden Sea food web based on actual d15N and d13C stabile isotope values

Multi-Scale Seagrass Patterning in Shark Bay, Western Australia

We investigated the factors driving unique self-organization patterns in seagrass beds.

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Seagrass bands in Shark Bay

Spatial Seagrass Patterns as Indicators of Resilience

Using drone aerial imagery, Marjolijn and Jim van Belzen analyzed how turtle grazing and hydrodynamics shape seagrass patterns, offering insights into ecosystem resilience

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UAV imagery showing seagrass patterns initiated by turtle grazing & hydrodynamics, Derawan